IDENTIFIKASI FRAGMEN HV1 DNA MITOKONDRIA INDIVIDU DATARAN RENDAH DAN DATARAN TINGGI

Rina Budi Satiyarti, Siti Aminah, Tina Dewi Rosahdi

Abstract


An individual adaptation towards the geographical altitude associated with genetic factors, one of the genetic materials of the most widely used to study the characteristic of individuals in the population is the mitochondrial DNA.Based on that condition, this research will deciding human Fragmen HVI mtDNA from Indramayu as lowland individual and Sukabumi as highland individual. The purpose of this research is to identify hair root and the epithelial cell of the mouth as a source DNA mitochondrial that can used for a amplification of human fragment DNA mitokondria template and to identify fragment territory HV1 mtDNA by using Polimerase Chain Reaction (PCR) technic and detecting the yield of PCR from lowland and highland individual. The steps include the lysis to do the sample of the hair root and the epithelial cell of the mouth, amplified HV1 fragment mtDNA to utilize Polimerase Chain Reaction (PCR) technique and the result of PCR with elektroforesis gel agarosa. This research has been successfully, hair root and the epithelial cell can do analyze DNA mitochondrial marked by the fragment measuring 0,4 kb in the area D-Loop mtDNA and it can easier amplification is hair root characterized by the presence of DNA bands in agarose gel electrophoresis.

Keywords


mtDNA, HV1, PCR, lowland, highland, D-loop

References


Gumilar, G.G, Supriyanti, F. M.T., Siti, H.H. (2008). Bioteknologi. Bandung : Jurusan Pendidikan Kimia FPMIPA UPI.

Devor, E.J.(2005). IDTutorial : Mitochondrial DNA).USA : Integrated DNA Technologies.

Poedjiadji, Anna dan Supriyanti F.M.T. (2006). Dasar-dasar Biokimia. Jakarta : Universitas Indonesia Press.

Wikipedia. 2014.http://id.wikipedia. Org/wiki/. diakses tanggal 1 November 2014, 21.30 WIB.

Gaffar, Shabrani, M.Si. 2007. Buku Ajar Bioteknologi Molekul. Bandung: FMIPA Universitas Padjajaran.

Stanfield, William D., Jaime S. Colome., Raul J. Cano. 2003. Shaum’s Easy Outlines: Molecular and Cell Biology. USA : McGraw-Hill Companies, Inc.

Purves, William K., David Sadava., Gordan H.Orians., and Craig Heller. 2004. Life : The Science Of Biology. Edisi Ketujuh. United Staties of America: Sinauer Associates and W. H. Freeman.

Yuwono, Tribowo. 2009. Biology Molekular.Jakarta: Erlangga.

Anderson, S. et al. (1981). “ Sequence and Organization of the Cambridge Reference Sequence for Human Mitochondrial DNA” . Nat Genet. 23, 147.

www.mitomap.org diakses pada tanggal 2 November 2014, 22.00 WIB.

Susmiarsih, T. (2010). Peran Genetik DNA Mitokondria pada Motilitas Spermatozoa. Majalah kesehatan Pharma Medika, 2010 Vol.2., No.2.

Nakada, K. (2006). Mitochondria- Related Male Infertility. PNAS: 103 (41): 151 48-53.

Giles, R.E., Blanc, H., Cann H.M., dan Wallace, D.C. 1980. “ Maternal Inheritance of Human Mitochondrial DNA “ . Proc. Natl. Acad. SCI . USA. 77, (11), 6715-6719.

Wallace, D.C., 1992: Diseases of the mitochondrial DNA, Annu Rev Biochem, 61, 1175-1212.

Bogrnhagen, Daniel F. 1999. DNA REPAIR’99 Repair of mtDNA in Vertebrates. Am. J. Hum. Genet. 64, 1276-1281.

Muladno. 2010. Teknologi Rekayasa Genetika. Edisi Kedua. Bogor. IPB Press.

Innis, M.A., Gelfan, D.H. (1990), Optimation of PCRs, PCR protocols :a guide to Methods and Aplications, Academic Press, Inc, California, 3-12.

Zyskind, J. W. and S. I. Bemstain. 1992. Recombinant DNA Manual. Academic Press., Inc. California.

Sambrook, J., Fritsc, E.F., and Maniatis, T., (1989), Molecular Cloning, A Laboratory Manual 2nd, Cold Spring Harbor Laboratory Press, New York.

Puspitasari, Dea.(2007). Urutan Nukleotida Daerah HVSI DNA Mitokondria Manusia Poli-C. Skripsi Program Studi ITB Bandung: Tidak diterbitkan.

Qiagen.(2006).Genomic DNA Purification. [Online]. Tersedia : http: //www. qiagen.com /literature brochurs /index. [5 Oktober 2015].

Ratnayani, K., et al (2007). “Analisis Variasi Nukleotida Daerah D-Loop DNA Mitokondria Pada Satu Individu Suku Bali Normal “ Jurnal Kimia 7-14




DOI: http://dx.doi.org/10.24042/biosf.v8i2.2296

Refbacks

  • There are currently no refbacks.




Copyright (c) 2018 Biosfer : Jurnal Tadris Biologi